NaviCell Data Visualization Web Service

NaviCell Web Service for Network-based Data Visualization allows mapping high-throughput data (mRNA, microRNA and protein expressions, gene copy number and mutation profiles, simple gene lists and clinical data) onto biological network maps, browsable with NaviCell. This can be done from within NaviCell graphical user interface (GUI) or programmatically using NaviCell REST API with available Python binding (R and Java bindings are in development). NaviCell Web Service provides both standard (barplots and heatmaps) and advanced original (glyphs and map staining) tools for visualizing omics data of different types simultaneously. All documentation for using NaviCell Web Service, including a user guide, a tutorial and several case studies, is available below. Live Example allows playing NaviCell Web Service interface by loading data (TCGA, ovary cancer, transcriptome, genome, mutations, clinical information) automatically and demonstrating all available data visualization tools.

NaviCell Web Service Live Example

User Guide and Tutorial

NaviCell Web Service REST API and bindings

Note: all the code is open-source and is released under the terms of the GNU LGPL license.

NaviCell Web Service Case Studies